halapi
hierarchichalalignmentformatapi
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File List
Here is a list of all documented files with brief descriptions:
[detail level 12]
\-inc
 o*hal.h
 o*halAlignment.h
 o*halAlignmentInstance.h
 o*halBottomSegment.h
 o*halBottomSegmentIterator.h
 o*halCLParser.h
 o*halCLParserInstance.h
 o*halColumnIterator.h
 o*halCommon.h
 o*halDefs.h
 o*halDNAIterator.h
 o*halGappedBottomSegmentIterator.h
 o*halGappedSegmentIterator.h
 o*halGappedTopSegmentIterator.h
 o*halGenome.h
 o*halMappedSegment.h
 o*halMetaData.h
 o*halPositionCache.h
 o*halRearrangement.h
 o*halSegment.h
 o*halSegmentedSequence.h
 o*halSegmentIterator.h
 o*halSequence.h
 o*halSequenceIterator.h
 o*halSlicedSegment.h
 o*halTopSegment.h
 o*halTopSegmentIterator.h
 \*halValidate.h