LICENSE
README.md
setup.py
src/cuteSV/CommandRunner.py
src/cuteSV/__init__.py
src/cuteSV/cuteSV.py
src/cuteSV/cuteSV_Description.py
src/cuteSV/cuteSV_forcecalling.py
src/cuteSV/cuteSV_genotype.py
src/cuteSV/cuteSV_resolveDUP.py
src/cuteSV/cuteSV_resolveINDEL.py
src/cuteSV/cuteSV_resolveINV.py
src/cuteSV/cuteSV_resolveTRA.py
src/cuteSV/diploid_calling.py
src/cuteSV/genotype_improve.c
src/cuteSV/prove_func.c
src/cuteSV/test.py
src/cuteSV_OL.egg-info/PKG-INFO
src/cuteSV_OL.egg-info/SOURCES.txt
src/cuteSV_OL.egg-info/dependency_links.txt
src/cuteSV_OL.egg-info/entry_points.txt
src/cuteSV_OL.egg-info/not-zip-safe
src/cuteSV_OL.egg-info/top_level.txt
src/online/__init__.py
src/online/compare_model.py
src/online/online.py
src/online/test.py
src/online/bin/pandepth