SeuratDisk-package | SeuratDisk: Interfaces for HDF5-Based Single Cell File Formats |
AppendData | Append data from an h5Seurat file to a preexisting 'Seurat' object |
AppendData.character | Append data from an h5Seurat file to a preexisting 'Seurat' object |
AppendData.H5File | Append data from an h5Seurat file to a preexisting 'Seurat' object |
AppendData.h5Seurat | Append data from an h5Seurat file to a preexisting 'Seurat' object |
as.array | Load data from an HDF5 File |
as.array.H5D | Load data from an HDF5 File |
as.data.frame | Load data from an HDF5 File |
as.data.frame.H5D | Load data from an HDF5 File |
as.data.frame.H5Group | Load data from an HDF5 File |
as.factor | Load data from an HDF5 File |
as.factor-method | Load data from an HDF5 File |
as.h5Seurat | Save a 'Seurat' object to an h5Seurat file |
as.h5Seurat.default | Save a 'Seurat' object to an h5Seurat file |
as.h5Seurat.H5File | Save a 'Seurat' object to an h5Seurat file |
as.h5Seurat.Seurat | Save a 'Seurat' object to an h5Seurat file |
as.list | Load data from an HDF5 File |
as.list-method | Load data from an HDF5 File |
as.logical | Load data from an HDF5 File |
as.logical.H5D | Load data from an HDF5 File |
as.loom | Save a 'Seurat' object to a loom file |
as.loom.default | Save a 'Seurat' object to a loom file |
as.loom.H5File | Save a 'Seurat' object to a loom file |
as.loom.Seurat | Save a 'Seurat' object to a loom file |
as.matrix | Load data from an HDF5 File |
as.matrix.H5D | Load data from an HDF5 File |
as.matrix.H5Group | Load data from an HDF5 File |
as.Seurat | Load a saved 'Seurat' object from an h5Seurat file |
as.Seurat | Loom-file Loading |
as.Seurat.h5Seurat | Load a saved 'Seurat' object from an h5Seurat file |
as.Seurat.loom | Loom-file Loading |
as.sparse | Load data from an HDF5 File |
as.sparse.H5D | Load data from an HDF5 File |
as.sparse.H5Group | Load data from an HDF5 File |
Cells | Seurat bindings for h5Seurat files |
Cells.h5Seurat | Seurat bindings for h5Seurat files |
Connect | Connect to a single-cell HDF5 dataset |
Convert | Convert an on-disk single-cell dataset to another format |
Convert.character | Convert an on-disk single-cell dataset to another format |
Convert.H5File | Convert an on-disk single-cell dataset to another format |
Convert.h5Seurat | Convert an on-disk single-cell dataset to another format |
DefaultAssay | Seurat bindings for h5Seurat files |
DefaultAssay | Seurat binding for loom files |
DefaultAssay.h5Seurat | Seurat bindings for h5Seurat files |
DefaultAssay.loom | Seurat binding for loom files |
DefaultAssay<-.h5Seurat | Seurat bindings for h5Seurat files |
dim | Seurat binding for loom files |
dim.loom | Seurat binding for loom files |
dimnames | Load data from an HDF5 File |
dimnames.H5D | Load data from an HDF5 File |
GetSCDisk | Get and Register 'scdisk' Subclasses |
h5Seurat | A class for connections to h5Seurat files |
h5Seurat-bindings | Seurat bindings for h5Seurat files |
h5Seurat-class | A class for connections to h5Seurat files |
Idents | Seurat bindings for h5Seurat files |
Idents.h5Seurat | Seurat bindings for h5Seurat files |
IsGlobal | Seurat bindings for h5Seurat files |
IsGlobal.H5Group | Seurat bindings for h5Seurat files |
Key | Seurat bindings for h5Seurat files |
Key.H5Group | Seurat bindings for h5Seurat files |
LoadH5Seurat | Load a saved 'Seurat' object from an h5Seurat file |
LoadH5Seurat.character | Load a saved 'Seurat' object from an h5Seurat file |
LoadH5Seurat.H5File | Load a saved 'Seurat' object from an h5Seurat file |
LoadH5Seurat.h5Seurat | Load a saved 'Seurat' object from an h5Seurat file |
LoadLoom | Loom-file Loading |
LoadLoom.character | Loom-file Loading |
LoadLoom.H5File | Loom-file Loading |
LoadLoom.loom | Loom-file Loading |
loom | A class for connections to loom files |
loom-bindings | Seurat binding for loom files |
loom-class | A class for connections to loom files |
Project | Seurat bindings for h5Seurat files |
Project.h5Seurat | Seurat bindings for h5Seurat files |
Project<-.h5Seurat | Seurat bindings for h5Seurat files |
ReadH5 | Load data from an HDF5 File |
RegisterSCDisk | Get and Register 'scdisk' Subclasses |
SaveH5Seurat | Save a 'Seurat' object to an h5Seurat file |
SaveH5Seurat.default | Save a 'Seurat' object to an h5Seurat file |
SaveH5Seurat.Seurat | Save a 'Seurat' object to an h5Seurat file |
SaveLoom | Save a 'Seurat' object to a loom file |
SaveLoom.default | Save a 'Seurat' object to a loom file |
SaveLoom.Seurat | Save a 'Seurat' object to a loom file |
scdisk | A disk-based object for single-cell analysis |
scdisk-class | A disk-based object for single-cell analysis |
SeuratDisk | SeuratDisk: Interfaces for HDF5-Based Single Cell File Formats |
Stdev.h5Seurat | Seurat bindings for h5Seurat files |
Transpose | Transpose a matrix |
Transpose.dgCMatrix | Transpose a matrix |
Transpose.H5D | Transpose a matrix |
Transpose.H5Group | Transpose a matrix |
WriteH5Group | Write data to an HDF5 group |
WriteH5Group-method | Write data to an HDF5 group |
_PACKAGE | SeuratDisk: Interfaces for HDF5-Based Single Cell File Formats |