get_param | Get params from saved var |
get_param_list | Get params from saved var |
init_params | Read params from files |
p4cBuildRequirements | Build the required genomic datasets. |
p4cCreate4CseqTrack | Import fastq files to a genomic track. |
p4cDumpConfFiles | Dump config files templates. |
p4cExportBedGraph | Export bedGraph |
p4cIntervalsMean | Compare contacts intensities between two profiles |
p4cLoadConfFiles | Load all the config files required for the package. |
p4cNewProfile | Create a new p4cProfile object. |
plot.p4cProfile | Plot 4C nearcis profile. |
plotCompProf | Plot 4C nearcis profile. |
plotSingleProf | Plot 4C nearcis profile. |