# This file created by conda-build 24.7.1
# meta.yaml template originally from:
# /opt/recipe, last modified Sat Dec 14 13:53:22 2024
# ------------------------------------------------

package:
  name: bioconductor-gdsfmt
  version: 1.42.0
source:
  md5: 394bd408a3aa442689ffdcb7d1999f6b
  url:
    - https://bioarchive.galaxyproject.org/gdsfmt_1.42.0.tar.gz
    - https://bioconductor.org/packages/3.20/bioc/src/contrib/Archive/gdsfmt/gdsfmt_1.42.0.tar.gz
    - https://bioconductor.org/packages/3.20/bioc/src/contrib/gdsfmt_1.42.0.tar.gz
    - https://depot.galaxyproject.org/software/bioconductor-gdsfmt/bioconductor-gdsfmt_1.42.0_src_all.tar.gz
build:
  number: '0'
  rpaths:
    - lib/
    - lib/R/lib/
  run_exports: bioconductor-gdsfmt >=1.42.0,<1.43.0a0
  string: r44h12ab77f_0
requirements:
  build:
    - _openmp_mutex 4.5 2_gnu
    - binutils_impl_linux-aarch64 2.43 h4c662bb_2
    - binutils_linux-aarch64 2.43 hf1166c9_2
    - gcc_impl_linux-aarch64 13.3.0 hcdea9b6_1
    - gcc_linux-aarch64 13.3.0 h1cd514b_7
    - gxx_impl_linux-aarch64 13.3.0 h1211b58_1
    - gxx_linux-aarch64 13.3.0 h2864abd_7
    - kernel-headers_linux-aarch64 4.18.0 h05a177a_18
    - ld_impl_linux-aarch64 2.43 h80caac9_2
    - libgcc 14.2.0 he277a41_1
    - libgcc-devel_linux-aarch64 13.3.0 h0c07274_101
    - libgomp 14.2.0 he277a41_1
    - libsanitizer 13.3.0 ha58e236_1
    - libstdcxx 14.2.0 h3f4de04_1
    - libstdcxx-devel_linux-aarch64 13.3.0 h0c07274_101
    - make 4.4.1 h2a6d0cb_2
    - sysroot_linux-aarch64 2.17 h5b4a56d_18
    - tzdata 2024b hc8b5060_0
  host:
    - _openmp_mutex 4.5 2_gnu
    - _r-mutex 1.0.1 anacondar_1
    - binutils_impl_linux-aarch64 2.43 h4c662bb_2
    - bwidget 1.10.1 h8af1aa0_0
    - bzip2 1.0.8 h68df207_7
    - c-ares 1.34.3 h86ecc28_1
    - ca-certificates 2024.8.30 hcefe29a_0
    - cairo 1.18.2 h83712da_1
    - curl 8.11.1 h6702fde_0
    - font-ttf-dejavu-sans-mono 2.37 hab24e00_0
    - font-ttf-inconsolata 3.000 h77eed37_0
    - font-ttf-source-code-pro 2.038 h77eed37_0
    - font-ttf-ubuntu 0.83 h77eed37_3
    - fontconfig 2.15.0 h8dda3cd_1
    - fonts-conda-ecosystem 1 0
    - fonts-conda-forge 1 0
    - freetype 2.12.1 hf0a5ef3_2
    - fribidi 1.0.10 hb9de7d4_0
    - gcc_impl_linux-aarch64 14.2.0 hc4119dd_1
    - gfortran_impl_linux-aarch64 14.2.0 hddc744a_1
    - graphite2 1.3.13 h2f0025b_1003
    - gsl 2.7 h294027d_0
    - gxx_impl_linux-aarch64 14.2.0 h03d099d_1
    - harfbuzz 9.0.0 hbf49d6b_1
    - icu 75.1 hf9b3779_0
    - kernel-headers_linux-aarch64 4.18.0 h05a177a_18
    - keyutils 1.6.1 h4e544f5_0
    - krb5 1.21.3 h50a48e9_0
    - ld_impl_linux-aarch64 2.43 h80caac9_2
    - lerc 4.0.0 h4de3ea5_0
    - libblas 3.9.0 8_hed5cd8a_netlib
    - libcblas 3.9.0 8_hed5cd8a_netlib
    - libcurl 8.11.1 h6702fde_0
    - libdeflate 1.22 h86ecc28_0
    - libedit 3.1.20191231 he28a2e2_2
    - libev 4.33 h31becfc_2
    - libexpat 2.6.4 h5ad3122_0
    - libffi 3.4.2 h3557bc0_5
    - libgcc 14.2.0 he277a41_1
    - libgcc-devel_linux-aarch64 14.2.0 h46490cb_101
    - libgcc-ng 14.2.0 he9431aa_1
    - libgfortran 14.2.0 he9431aa_1
    - libgfortran-ng 14.2.0 he9431aa_1
    - libgfortran5 14.2.0 hb6113d0_1
    - libglib 2.82.2 hc486b8e_0
    - libgomp 14.2.0 he277a41_1
    - libiconv 1.17 h31becfc_2
    - libjpeg-turbo 3.0.0 h31becfc_1
    - liblapack 3.9.0 8_hed5cd8a_netlib
    - liblzma 5.6.3 h86ecc28_1
    - liblzma-devel 5.6.3 h86ecc28_1
    - libnghttp2 1.64.0 hc8609a4_0
    - libpng 1.6.44 hc4a20ef_0
    - libsanitizer 14.2.0 hff26f3d_1
    - libssh2 1.11.1 ha41c0db_0
    - libstdcxx 14.2.0 h3f4de04_1
    - libstdcxx-devel_linux-aarch64 14.2.0 h46490cb_101
    - libstdcxx-ng 14.2.0 hf1166c9_1
    - libtiff 4.7.0 hca96517_2
    - libuuid 2.38.1 hb4cce97_0
    - libwebp-base 1.4.0 h31becfc_0
    - libxcb 1.17.0 h262b8f6_0
    - libzlib 1.3.1 h86ecc28_2
    - make 4.4.1 h2a6d0cb_2
    - ncurses 6.5 hcccb83c_1
    - openssl 3.4.0 h86ecc28_0
    - pango 1.54.0 hf175a2e_3
    - pcre2 10.44 h070dd5b_2
    - pixman 0.44.2 h86a87f0_0
    - pthread-stubs 0.4 h86ecc28_1002
    - r-base 4.4.2 h47223e1_0
    - readline 8.2 h8fc344f_1
    - sed 4.8 ha0d5d3d_0
    - sysroot_linux-aarch64 2.17 h5b4a56d_18
    - tk 8.6.13 h194ca79_0
    - tktable 2.10 h52f7bd3_6
    - tzdata 2024b hc8b5060_0
    - xorg-libice 1.1.1 h57736b2_1
    - xorg-libsm 1.2.4 hbac51e1_1
    - xorg-libx11 1.8.10 hca56bd8_1
    - xorg-libxau 1.0.11 h86ecc28_1
    - xorg-libxdmcp 1.1.5 h57736b2_0
    - xorg-libxext 1.3.6 h57736b2_0
    - xorg-libxrender 0.9.11 h86ecc28_2
    - xorg-libxt 1.3.1 h57736b2_0
    - xz 5.6.3 h2dbfc1b_1
    - xz-gpl-tools 5.6.3 h2dbfc1b_1
    - xz-tools 5.6.3 h86ecc28_1
    - zstd 1.5.6 h02f22dd_0
  run:
    - libblas >=3.9.0,<4.0a0
    - libgcc >=13
    - liblapack >=3.9.0,<4.0a0
    - libstdcxx >=13
    - r-base >=4.4,<4.5.0a0
    - r-base >=4.4,<4.5.0a0
test:
  commands:
    - $R -e "library('gdsfmt')"
about:
  description: Provides a high-level R interface to CoreArray Genomic Data Structure
    (GDS) data files. GDS is portable across platforms with hierarchical structure
    to store multiple scalable array-oriented data sets with metadata information.
    It is suited for large-scale datasets, especially for data which are much larger
    than the available random-access memory. The gdsfmt package offers the efficient
    operations specifically designed for integers of less than 8 bits, since a diploid
    genotype, like single-nucleotide polymorphism (SNP), usually occupies fewer bits
    than a byte. Data compression and decompression are available with relatively
    efficient random access. It is also allowed to read a GDS file in parallel with
    multiple R processes supported by the package parallel.
  home: https://bioconductor.org/packages/3.20/bioc/html/gdsfmt.html
  license: LGPL-3
  license_file: /opt/conda/conda-bld/bioconductor-gdsfmt_1734186515241/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_pla/lib/R/share/licenses/LGPL-3
  summary: R Interface to CoreArray Genomic Data Structure (GDS) Files
extra:
  additional-platforms:
    - linux-aarch64
  copy_test_source_files: true
  final: true
