Time sensitive microRNA-mRNA integration, analysis and network generation tool


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Documentation for package ‘TimiRGeN’ version 1.0.3

Help Pages

addIds addIds
addPrefix addPrefix
clusterCheck clusterCheck
combineGenes combineGenes
createClusters createClusters
cytoMake cytoMake
dataMiningMatrix dataMiningMatrix
diffExpressRes diffExpressRes
dloadGmt dloadGmt
dloadMirdb dloadMirdb
dloadMirtarbase dloadMirtarbase
dloadTargetscan dloadTargetscan
eNames eNames
enrichWiki enrichWiki
e_list_mouse e_list_mouse
genesList genesList
getIdsMir getIdsMir
getIdsMrna getIdsMrna
gmtEnsembl gmtEnsembl
hs_miR Human microRNA data set
hs_mRNA Human mRNA data set
makeDynamic makeDynamic
makeMapp makeMapp
makeNet makeNet
matrixFilter matrixFilter
mirMrnaInt mirMrnaInt
miRTarBase miRTarBase dataset
mm_miR Mouse microRNA data
mm_mRNA Mouse microRNA data
quickBar quickBar
quickDot quickDot
quickFuzz quickFuzz
quickNet quickNet
reduceWiki reduceWiki
returnCluster returnCluster
savePlots savePlots
significantVals significantVals
startObject startObject
turnPercent turnPercent
wikiList wikiList
wikiMatrix wikiMatrix
wikiMrna wikiMrna
w_list_mouse Wikipathways lists for mouse produced by the wikiList function.