class BwaMem2Args extends ReadGroupArgs
Bwa-mem2 function arguments.
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- new BwaMem2Args()
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final
def
!=(arg0: Any): Boolean
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final
def
##(): Int
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def
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def
createReadGroup(): ReadGroup
Create a read group from the arguments in this class.
Create a read group from the arguments in this class.
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a read group created from the arguments in this class.
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var
doPrintUsage: Boolean
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final
def
eq(arg0: AnyRef): Boolean
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def
equals(arg0: Any): Boolean
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def
finalize(): Unit
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var
flowOrder: String
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final
def
getClass(): Class[_]
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def
hashCode(): Int
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final
def
isInstanceOf[T0]: Boolean
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var
keySequence: String
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var
library: String
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final
def
ne(arg0: AnyRef): Boolean
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final
def
notify(): Unit
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final
def
notifyAll(): Unit
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var
platform: String
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var
platformModel: String
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var
platformUnit: String
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var
predictedMedianInsertSize: Integer
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- ReadGroupArgs
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var
readGroup: ReadGroup
Read group, to specify directly.
Read group, to specify directly.
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var
readGroupId: String
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var
runDate: Long
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var
sampleId: String
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var
sequencingCenter: String
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- var sudo: Boolean
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final
def
synchronized[T0](arg0: ⇒ T0): T0
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def
toString(): String
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final
def
wait(): Unit
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final
def
wait(arg0: Long, arg1: Int): Unit
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final
def
wait(arg0: Long): Unit
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