[console_scripts]
assign_mi = harpy.scripts:assign_mi.main
bx_stats = harpy.scripts:bx_stats.main
bx_to_end = harpy.scripts:bx_to_end.main
check_bam = harpy.scripts:check_bam.main
check_fastq = harpy.scripts:check_fastq.main
concatenate_bam = harpy.scripts:concatenate_bam.main
count_bx = harpy.scripts:count_bx.main
create_simulation_data = harpy.scripts:create_simulation_data.main
deconvolve_alignments = harpy.scripts:deconvolve_alignments.main
depth_windows = harpy.scripts:depth_windows.main
extract_bxtags = harpy.scripts:extract_bxtags.main
haplotag_acbd = harpy.scripts:haplotag_acbd.main
haplotag_barcodes = harpy.scripts:haplotag_barcodes.main
harpy = harpy.__main__:cli
infer_sv = harpy.scripts:infer_sv.main
make_windows = harpy.scripts:make_windows.main
molecule_coverage = harpy.scripts:molecule_coverage.main
parse_phaseblocks = harpy.scripts:parse_phaseblocks.main
rename_bam = harpy.scripts:rename_bam.main
separate_singletons = harpy.scripts:separate_singletons.main
separate_validbx = harpy.scripts:separate_validbx.main
standardize_barcodes_sam = harpy.scripts:standardize_barcodes_sam.main
