Coercion methods for biological data

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Documentation for package ‘transformer’ version 0.2.0

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as.data.frame Coerce to data frame
as.data.frame-method Coerce to data frame
as.data.table Coerce to data table
as.data.table.DataFrame Coerce to data table
as.data.table.GenomicRanges Coerce to data table
as.data.table.IPosRanges Coerce to data table
as.SummarizedExperiment Coerce to summarized experiment
as.SummarizedExperiment.RangedSummarizedExperiment Coerce to summarized experiment
as.SummarizedExperiment.SummarizedExperiment Coerce to summarized experiment
as_tibble Coerce to tibble
as_tibble.DataFrame Coerce to tibble
as_tibble.GenomicRanges Coerce to tibble
as_tibble.IPosRanges Coerce to tibble
atomize Atomize
atomize-method Atomize
coerce-data.frame Coerce to data frame
coerce-data.table Coerce to data table
coerce-DataFrame Coerce to data frame
coerce-method Coerce to data frame
coerce-method Coerce to data frame
coerce-method Coerce to data table
coerce-method Coerce to tibble
coerce-SummarizedExperiment Coerce to summarized experiment
coerce-tbl_df Coerce to tibble
coerceS4ToList Coerce any S4 object to a list
decode Decode column data that uses run-length encoding
decode-method Decode column data that uses run-length encoding
encode Encode using run-length encoding
encode-method Encode using run-length encoding
factorize Factorize
factorize-method Factorize
flatFiles Coerce any S4 object to a list
flatFiles-method Coerce any S4 object to a list
join Join operations supporting S4 class objects
left_join Join operations supporting S4 class objects
left_join.DataFrame Join operations supporting S4 class objects
matchRowNameColumn Match row name column
relevel Reorder factor levels
relevel.DataFrame Reorder factor levels
relevel.Ranges Reorder factor levels
relevel.SummarizedExperiment Reorder factor levels