bin/panisoguard
share/panisoguard/examples/multi_caller/.gitignore
share/panisoguard/examples/multi_caller/README.md
share/panisoguard/examples/multi_caller/data/bambu.gtf
share/panisoguard/examples/multi_caller/data/flair.classification.tsv
share/panisoguard/examples/multi_caller/data/flair.gtf
share/panisoguard/examples/multi_caller/data/isoquant.gtf
share/panisoguard/examples/multi_caller/data/reference.gtf
share/panisoguard/examples/multi_caller/expected/sample.adjudicated.tsv
share/panisoguard/examples/multi_caller/run.sh
share/panisoguard/examples/tiny/.gitignore
share/panisoguard/examples/tiny/README.md
share/panisoguard/examples/tiny/data/caller.gtf
share/panisoguard/examples/tiny/data/classification.tsv
share/panisoguard/examples/tiny/data/reference.gtf
share/panisoguard/examples/tiny/data/short_read.SJ.tab
share/panisoguard/examples/tiny/expected/sample.adjudicated.tsv
share/panisoguard/examples/tiny/expected/sample.attribution.jsonl
share/panisoguard/examples/tiny/expected/sample.junctions.tsv
share/panisoguard/examples/tiny/expected/sample.provenance.log
share/panisoguard/examples/tiny/run.sh
share/panisoguard/notes/data/build_toy.sh
share/panisoguard/notes/data/caller1.gtf
share/panisoguard/notes/data/caller1_classification.txt
share/panisoguard/notes/data/caller2.gtf
share/panisoguard/notes/data/hap1.fa
share/panisoguard/notes/data/hap1.fa.fai
share/panisoguard/notes/data/hap2.fa
share/panisoguard/notes/data/hap2.fa.fai
share/panisoguard/notes/data/long_reads.bam
share/panisoguard/notes/data/long_reads.bam.bai
share/panisoguard/notes/data/long_reads.sam
share/panisoguard/notes/data/make_toy.py
share/panisoguard/notes/data/reference.gtf
share/panisoguard/notes/data/short_reads.SJ.out.tab
share/panisoguard/notes/data/short_reads.fq
share/panisoguard/notes/data/toy.fa
share/panisoguard/notes/data/toy.fa.fai
