bin/RNAz
bin/coloraln.pl
bin/colorrna.pl
bin/convertMaf.pl
bin/extractMAFblock.pl
bin/mafStats.pl
bin/mpi.pl
bin/rnazAnnotate.pl
bin/rnazBEDsort.pl
bin/rnazBEDstats.pl
bin/rnazBlast.pl
bin/rnazCMsearch.pl
bin/rnazCluster.pl
bin/rnazFilter.pl
bin/rnazIndex.pl
bin/rnazMAF2BED.pl
bin/rnazMaf2Coordinates.pl
bin/rnazMafRenumberMaf.pl
bin/rnazMafSplit.pl
bin/rnazOutputSort.pl
bin/rnazRandomizeAln.pl
bin/rnazSelectSeqs.pl
bin/rnazSliceAlnByPos.pl
bin/rnazSort.pl
bin/rnazWindow.pl
bin/rnazWindow_gq.pl
bin/stats2plot.pl
lib/perl5/site_perl/RNAz.pm
share/RNAz/AUTHORS
share/RNAz/COPYING
share/RNAz/INSTALL
share/RNAz/README
share/RNAz/TODO
share/RNAz/examples/IRE.aln
share/RNAz/examples/miRNA.maf
share/RNAz/examples/snoRNA.aln
share/RNAz/examples/tRNA.aln
share/RNAz/examples/tRNA.maf
share/RNAz/examples/unknown.aln
share/RNAz/manual.pdf
share/RNAz/models/L50-200_GC20-30_avg.inc
share/RNAz/models/L50-200_GC20-30_stdv.inc
share/RNAz/models/L50-200_GC30-36_avg.inc
share/RNAz/models/L50-200_GC30-36_stdv.inc
share/RNAz/models/L50-200_GC36-40_avg.inc
share/RNAz/models/L50-200_GC36-40_stdv.inc
share/RNAz/models/L50-200_GC40-46_avg.inc
share/RNAz/models/L50-200_GC40-46_stdv.inc
share/RNAz/models/L50-200_GC46-50_avg.inc
share/RNAz/models/L50-200_GC46-50_stdv.inc
share/RNAz/models/L50-200_GC50-56_avg.inc
share/RNAz/models/L50-200_GC50-56_stdv.inc
share/RNAz/models/L50-200_GC56-60_avg.inc
share/RNAz/models/L50-200_GC56-60_stdv.inc
share/RNAz/models/L50-200_GC60-66_avg.inc
share/RNAz/models/L50-200_GC60-66_stdv.inc
share/RNAz/models/L50-200_GC66-70_avg.inc
share/RNAz/models/L50-200_GC66-70_stdv.inc
share/RNAz/models/L50-200_GC70-80_avg.inc
share/RNAz/models/L50-200_GC70-80_stdv.inc
share/RNAz/models/decision.inc
share/RNAz/models/decision_dinucleotide.inc
share/RNAz/models/decision_dinucleotide_structural.inc
share/RNAz/models/mfe_avg.inc
share/RNAz/models/mfe_stdv.inc
share/RNAz/models/strand.inc
share/RNAz/perl/coloraln.pl
share/RNAz/perl/colorrna.pl
share/RNAz/perl/convertMaf.pl
share/RNAz/perl/extractMAFblock.pl
share/RNAz/perl/mafStats.pl
share/RNAz/perl/mpi.pl
share/RNAz/perl/rnazAnnotate.pl
share/RNAz/perl/rnazBEDsort.pl
share/RNAz/perl/rnazBEDstats.pl
share/RNAz/perl/rnazBlast.pl
share/RNAz/perl/rnazCMsearch.pl
share/RNAz/perl/rnazCluster.pl
share/RNAz/perl/rnazFilter.pl
share/RNAz/perl/rnazIndex.pl
share/RNAz/perl/rnazMAF2BED.pl
share/RNAz/perl/rnazMaf2Coordinates.pl
share/RNAz/perl/rnazMafRenumberMaf.pl
share/RNAz/perl/rnazMafSplit.pl
share/RNAz/perl/rnazOutputSort.pl
share/RNAz/perl/rnazRandomizeAln.pl
share/RNAz/perl/rnazSelectSeqs.pl
share/RNAz/perl/rnazSliceAlnByPos.pl
share/RNAz/perl/rnazSort.pl
share/RNAz/perl/rnazWindow.pl
share/RNAz/perl/rnazWindow_gq.pl
share/RNAz/perl/stats2plot.pl
share/man/man1/RNAz.1
